1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_15G03610.1

PTI_15G03610.1


Description : Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B [Interproscan].


Gene families : OG_01_0003781 (OrthoFinder) Phylogenetic Tree(s): OG0003781_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_15G03610.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cre09.g408600 30781420 4,5-DOPA dioxygenase extradiol OS=Beta vulgaris 0.04 OrthoFinder
Cz12g28150.t1 No alias Extradiol ring-cleavage dioxygenase, class III enzyme,... 0.03 OrthoFinder
Sro176_g077250.1 Contig203.g2412 DOPA dioxygenase extradiol 0.04 OrthoFinder
lcl|BLLF01001897.1_cds_GFH21744.1_16221 HaLaN_19106, GFH21744 ANK_REP_REGION domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006725 cellular aromatic compound metabolic process IEA Interproscan
MF GO:0008198 ferrous iron binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032879 regulation of localization IEP Enrichment
BP GO:0032880 regulation of protein localization IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0050708 regulation of protein secretion IEP Enrichment
BP GO:0051046 regulation of secretion IEP Enrichment
BP GO:0051049 regulation of transport IEP Enrichment
BP GO:0051223 regulation of protein transport IEP Enrichment
BP GO:0070201 regulation of establishment of protein localization IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1903530 regulation of secretion by cell IEP Enrichment
InterPro domains Description Start Stop
IPR004183 Xdiol_dOase_suB 27 238
No external refs found!