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  5. PTI_15G00010.1

PTI_15G00010.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000066 (OrthoFinder) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_15G00010.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
PTI_00G01000.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G01600.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_00G01920.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_00G02200.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_00G02280.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_00G02470.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G04610.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_01G05240.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.08 OrthoFinder
PTI_01G08070.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_01G08080.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_01G11800.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_03G00490.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_03G05890.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_03G05910.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_04G00260.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_06G02350.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_09G01500.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_09G01520.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.11 OrthoFinder
PTI_09G01560.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_09G02870.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_09G02880.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_11G00020.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_16G00080.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_16G00750.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.08 OrthoFinder
PTI_16G02500.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_16G02510.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_17G02300.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_18G00100.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.14 OrthoFinder
PTI_18G02870.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_20G00080.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_24G00370.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_24G01870.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_25G00030.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_27G01660.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_29G00070.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_29G00090.1 No alias Glycoside hydrolase family 1; Reverse transcriptase,... 0.03 OrthoFinder
PTI_31G00190.1 No alias Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 421 636
No external refs found!