- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Chlorophyll A-B binding protein [Interproscan].
Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_14G03460.1 | |
| Cluster | HCCA: Cluster_29 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre08.g365900 | 30773702, LHCSR1 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder | |
| Cre08.g367400 | 30773729, LHCSR3 | Photosynthesis.photophosphorylation.photosystem... | 0.01 | OrthoFinder | |
| Cre08.g367500 | 30774166, LHCSR2 | Photosynthesis.photophosphorylation.photosystem... | 0.01 | OrthoFinder | |
| Cz16g02040.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| EOD03771 | No alias | Light-harvesting family [Ensembl]. | 0.01 | OrthoFinder | |
| EOD03774 | No alias | Light-harvesting family [Ensembl]. | 0.02 | OrthoFinder | |
| EOD05780 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD06468 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD08607 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD12013 | No alias | Light harvesting protein [Ensembl]. | 0.01 | OrthoFinder | |
| EOD15375 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD19744 | No alias | Light harvesting protein [Ensembl]. | 0.01 | OrthoFinder | |
| EOD20807 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| EOD20809 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD32137 | No alias | Light harvesting protein [Ensembl]. | 0.01 | OrthoFinder | |
| EOD40541 | No alias | Light harvesting protein [Ensembl]. | 0.01 | OrthoFinder | |
| Sro1207_g252450.1 | Contig242.g2948 | B binding protein L1818, chloroplastic | 0.03 | OrthoFinder | |
| Sro122_g059170.1 | Contig71.g736 | Chloroplastic | 0.04 | OrthoFinder | |
| Sro132_g062570.1 | Contig2745.g22100 | Chloroplastic | 0.06 | OrthoFinder | |
| Sro1347_g264950.1 | Contig4640.g34581 | B binding protein 6, chloroplastic | 0.06 | OrthoFinder | |
| Sro1430_g271970.1 | Contig4579.g34184 | B binding protein L1818, chloroplastic | 0.08 | OrthoFinder | |
| Sro149_g068330.1 | Contig259.g3201 | Chloroplastic | 0.05 | OrthoFinder | |
| Sro149_g068340.1 | Contig259.g3202 | B binding protein L1818, chloroplastic | 0.04 | OrthoFinder | |
| Sro1506_g278310.1 | Contig3888.g29862 | Chloroplastic | 0.06 | OrthoFinder | |
| Sro235_g094670.1 | Contig114.g1302 | Chloroplastic | 0.02 | OrthoFinder | |
| Sro2423_g327210.1 | Contig3569.g27581 | Chloroplastic | 0.1 | OrthoFinder | |
| Sro288_g108750.1 | Contig62.g495 | B binding protein L1818, chloroplastic | 0.04 | OrthoFinder | |
| Sro412_g137900.1 | Contig2922.g23262 | Chloroplastic | 0.09 | OrthoFinder | |
| Sro60_g034620.1 | Contig797.g8939 | Chloroplastic | 0.04 | OrthoFinder | |
| Sro652_g181650.1 | Contig2024.g17318 | Chloroplastic | 0.05 | OrthoFinder | |
| Sro656_g182410.1 | Contig256.g3152 | Chloroplastic | 0.06 | OrthoFinder | |
| Sro698_g189300.1 | Contig480.g6500 | Chlorophyll a | 0.07 | OrthoFinder | |
| Sro698_g189330.1 | Contig480.g6503 | Chloroplastic | 0.06 | OrthoFinder | |
| Sro74_g040880.1 | Contig4700.g34950 | I chlorophyll a/b-binding protein | 0.03 | OrthoFinder | |
| Sro829_g208070.1 | Contig1016.g10166 | Chloroplastic | 0.06 | OrthoFinder | |
| Sro844_g209920.1 | Contig403.g5457 | Chloroplastic | 0.07 | OrthoFinder | |
| TP01G11130.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.07 | OrthoFinder | |
| TP08G04750.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| TP23G00990.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| TP23G01260.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| TP23G01270.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| TP23G01280.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| XM_002506509.1 | MICPUN_105009, 105009 | Chlorophyll a/b-binding protein (LI818R) | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001733 | galactosylceramide sulfotransferase activity | IEP | Enrichment |
| MF | GO:0003747 | translation release factor activity | IEP | Enrichment |
| MF | GO:0003989 | acetyl-CoA carboxylase activity | IEP | Enrichment |
| MF | GO:0004347 | glucose-6-phosphate isomerase activity | IEP | Enrichment |
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Enrichment |
| MF | GO:0004512 | inositol-3-phosphate synthase activity | IEP | Enrichment |
| CC | GO:0005794 | Golgi apparatus | IEP | Enrichment |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Enrichment |
| BP | GO:0005991 | trehalose metabolic process | IEP | Enrichment |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Enrichment |
| BP | GO:0006020 | inositol metabolic process | IEP | Enrichment |
| BP | GO:0006021 | inositol biosynthetic process | IEP | Enrichment |
| BP | GO:0006094 | gluconeogenesis | IEP | Enrichment |
| BP | GO:0006334 | nucleosome assembly | IEP | Enrichment |
| BP | GO:0006415 | translational termination | IEP | Enrichment |
| BP | GO:0006629 | lipid metabolic process | IEP | Enrichment |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Enrichment |
| BP | GO:0006813 | potassium ion transport | IEP | Enrichment |
| MF | GO:0008079 | translation termination factor activity | IEP | Enrichment |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Enrichment |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Enrichment |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0010024 | phytochromobilin biosynthetic process | IEP | Enrichment |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015297 | antiporter activity | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Enrichment |
| MF | GO:0016421 | CoA carboxylase activity | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016636 | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Enrichment |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Enrichment |
| MF | GO:0016885 | ligase activity, forming carbon-carbon bonds | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| BP | GO:0017038 | protein import | IEP | Enrichment |
| BP | GO:0019319 | hexose biosynthetic process | IEP | Enrichment |
| BP | GO:0022411 | cellular component disassembly | IEP | Enrichment |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Enrichment |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Enrichment |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Enrichment |
| BP | GO:0034728 | nucleosome organization | IEP | Enrichment |
| BP | GO:0043624 | cellular protein complex disassembly | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Enrichment |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Enrichment |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | Enrichment |
| BP | GO:0046173 | polyol biosynthetic process | IEP | Enrichment |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0046364 | monosaccharide biosynthetic process | IEP | Enrichment |
| MF | GO:0050694 | galactose 3-O-sulfotransferase activity | IEP | Enrichment |
| MF | GO:0050897 | cobalt ion binding | IEP | Enrichment |
| BP | GO:0051202 | phytochromobilin metabolic process | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Enrichment |
| MF | GO:0070569 | uridylyltransferase activity | IEP | Enrichment |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 69 | 227 |
| No external refs found! |