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  5. PTI_14G01970.1

PTI_14G01970.1


Description : Ribosomal protein L29e [Interproscan].


Gene families : OG_01_0005745 (OrthoFinder) Phylogenetic Tree(s): OG0005745_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_14G01970.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Cre03.g207050 30787604, RPL29 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder
OT_11G02470.1 No alias Ribosomal protein L29e [Interproscan]. 0.05 OrthoFinder
TP17G00850.1 No alias Ribosomal protein L29e [Interproscan]. 0.04 OrthoFinder
Vocar.0011s0241.1 32895495 Ribosomal protein L29e [Interproscan]. 0.04 OrthoFinder
XM_002508934.1 MICPUN_87366, 87366 Ribosomal protein L29e [Interproscan]. 0.04 OrthoFinder
XM_003061733.1 MicpuC2_35383, 35383 Ribosomal protein L29e [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20726.1_5243 PRW20726 60S ribosomal L29-1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002673 Ribosomal_L29e 4 42
No external refs found!