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  5. PTI_13G04170.1

PTI_13G04170.1


Description : Ribonuclease III domain [Interproscan].


Gene families : OG_01_0002750 (OrthoFinder) Phylogenetic Tree(s): OG0002750_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_13G04170.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
XM_002507148.1 MICPUN_55187, 55187 Ribonuclease III domain-containing protein (RN3.2) 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005956 protein kinase CK2 complex IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006077 (1->6)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006078 (1->6)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0019104 DNA N-glycosylase activity IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000999 RNase_III_dom 18 114
No external refs found!