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  5. PTI_13G04040.1

PTI_13G04040.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000435 (OrthoFinder) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_13G04040.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
PTI_01G00030.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_01G01440.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_04G04200.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_04G04210.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_11G04460.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_12G02080.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_12G02130.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_12G02250.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_13G00190.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_13G02360.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_13G02370.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_14G01620.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_15G02820.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_15G03660.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_20G00110.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_24G01590.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_24G01670.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_26G00280.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_31G00970.1 No alias Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 652 772
No external refs found!