PTI_13G03970.1

Description : DNA polymerase alpha/delta/epsilon, subunit B; DNA polymerase delta subunit, OB-fold domain [Interproscan].

Gene families : OG_01_0002490 (OrthoFinder) Phylogenetic Tree(s): OG0002490_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: PTI_13G03970.1
Cluster	HCCA: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000241.178	tig00000241_g21049.t1	Cell cycle.interphase.DNA replication.elongation.DNA...	0.02	OrthoFinder
Cre08.g374050	30774111	Cell cycle.interphase.DNA replication.elongation.DNA...	0.04	OrthoFinder
EOD30076	No alias	DNA polymeras-like protein subunit POLD2 [Ensembl].	0.02	OrthoFinder
TP06G02370.1	No alias	DNA polymerase delta subunit, OB-fold domain; DNA...	0.02	OrthoFinder
Vocar.0036s0127.1	32892168	DNA polymerase alpha/delta/epsilon, subunit B; DNA...	0.02	OrthoFinder
XM_002505166.1	MICPUN_86679, 86679	DNA polymerase alpha/delta/epsilon, subunit B; DNA...	0.03	OrthoFinder
XM_003060360.1	MicpuC2_19376, 19376	DNA polymerase alpha/delta/epsilon, subunit B; DNA...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Enrichment
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Enrichment
MF	GO:0003824	catalytic activity	IEP	Enrichment
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	Enrichment
MF	GO:0003896	DNA primase activity	IEP	Enrichment
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Enrichment
MF	GO:0004427	inorganic diphosphatase activity	IEP	Enrichment
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Enrichment
MF	GO:0004779	sulfate adenylyltransferase activity	IEP	Enrichment
MF	GO:0004781	sulfate adenylyltransferase (ATP) activity	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
CC	GO:0005869	dynactin complex	IEP	Enrichment
CC	GO:0005875	microtubule associated complex	IEP	Enrichment
BP	GO:0006269	DNA replication, synthesis of RNA primer	IEP	Enrichment
BP	GO:0006397	mRNA processing	IEP	Enrichment
BP	GO:0006464	cellular protein modification process	IEP	Enrichment
BP	GO:0006807	nitrogen compound metabolic process	IEP	Enrichment
CC	GO:0008303	caspase complex	IEP	Enrichment
MF	GO:0008374	O-acyltransferase activity	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
BP	GO:0016071	mRNA metabolic process	IEP	Enrichment
BP	GO:0016255	attachment of GPI anchor to protein	IEP	Enrichment
MF	GO:0016289	CoA hydrolase activity	IEP	Enrichment
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016670	oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor	IEP	Enrichment
MF	GO:0016779	nucleotidyltransferase activity	IEP	Enrichment
MF	GO:0016790	thiolester hydrolase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0016853	isomerase activity	IEP	Enrichment
MF	GO:0016859	cis-trans isomerase activity	IEP	Enrichment
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Enrichment
MF	GO:0016972	thiol oxidase activity	IEP	Enrichment
BP	GO:0018193	peptidyl-amino acid modification	IEP	Enrichment
BP	GO:0018208	peptidyl-proline modification	IEP	Enrichment
BP	GO:0019538	protein metabolic process	IEP	Enrichment
BP	GO:0031123	RNA 3'-end processing	IEP	Enrichment
BP	GO:0031124	mRNA 3'-end processing	IEP	Enrichment
BP	GO:0032774	RNA biosynthetic process	IEP	Enrichment
BP	GO:0036211	protein modification process	IEP	Enrichment
CC	GO:0042765	GPI-anchor transamidase complex	IEP	Enrichment
BP	GO:0043412	macromolecule modification	IEP	Enrichment
BP	GO:0044238	primary metabolic process	IEP	Enrichment
BP	GO:0044267	cellular protein metabolic process	IEP	Enrichment
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Enrichment
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment
MF	GO:0070566	adenylyltransferase activity	IEP	Enrichment
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Enrichment
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Enrichment
CC	GO:1905368	peptidase complex	IEP	Enrichment
CC	GO:1905369	endopeptidase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007185	DNA_pol_a/d/e_bsu	208	414
IPR040663	DNA_pol_D_N	41	176

External Links

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PTI_13G03970.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation