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  5. PTI_13G03600.1

PTI_13G03600.1


Description : Ribosomal protein L32e [Interproscan].


Gene families : OG_01_0003368 (OrthoFinder) Phylogenetic Tree(s): OG0003368_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_13G03600.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.140 tig00020554_g10919.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.29 OrthoFinder
Cre06.g289550 30780114, RPL32 Protein biosynthesis.cytosolic ribosome.large subunit... 0.37 OrthoFinder
Cz11g16180.t1 No alias Ribosomal protein L32e [Interproscan]. 0.19 OrthoFinder
Dusal.0931s00005.1 33189912 Ribosomal protein L32e [Interproscan]. 0.2 OrthoFinder
EOD35360 No alias Ribosomal protein L32e [Interproscan]. 0.18 OrthoFinder
EOD35362 No alias Ribosomal protein L32e [Interproscan]. 0.18 OrthoFinder
OT_04G01320.1 No alias Ribosomal protein L32e [Interproscan]. 0.18 OrthoFinder
Sro182_g079470.1 Contig1301.g12083 60S ribosomal protein L32 0.41 OrthoFinder
SymbC1.scaffold5627.3 5627.3 Ribosomal protein L32e [Interproscan]. 0.08 OrthoFinder
TP12G00110.1 No alias Ribosomal protein L32e [Interproscan]. 0.32 OrthoFinder
Vocar.0001s1497.1 32884164 Ribosomal protein L32e [Interproscan]. 0.17 OrthoFinder
XM_002508155.1 MICPUN_91456, 91456 Ribosomal protein L32e [Interproscan]. 0.31 OrthoFinder
XM_003057642.1 MicpuC2_49537, 49537 Ribosomal protein L32e [Interproscan]. 0.11 OrthoFinder
lcl|BLLF01000296.1_cds_GFH10216.1_4693 HaLaN_05489, GFH10216 Ribosomal protein L32e [Interproscan]. 0.13 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44541.1_2370 PRW44541 60S ribosomal L32-1 0.16 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494591.1_3121 KAA8494591 60S ribosomal protein L32 0.15 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR001515 Ribosomal_L32e 17 125
No external refs found!