- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Pre-mRNA polyadenylation factor Fip1 domain [Interproscan].
Gene families : OG_01_0004606 (OrthoFinder) Phylogenetic Tree(s): OG0004606_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_13G03530.1 | |
| Cluster | HCCA: Cluster_124 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000469 | cleavage involved in rRNA processing | IEP | Enrichment |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004817 | cysteine-tRNA ligase activity | IEP | Enrichment |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
| BP | GO:0006423 | cysteinyl-tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | Enrichment |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | Enrichment |
| MF | GO:0008238 | exopeptidase activity | IEP | Enrichment |
| MF | GO:0008483 | transaminase activity | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Enrichment |
| MF | GO:0019899 | enzyme binding | IEP | Enrichment |
| CC | GO:0030173 | integral component of Golgi membrane | IEP | Enrichment |
| CC | GO:0031228 | intrinsic component of Golgi membrane | IEP | Enrichment |
| CC | GO:0031300 | intrinsic component of organelle membrane | IEP | Enrichment |
| CC | GO:0031301 | integral component of organelle membrane | IEP | Enrichment |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Enrichment |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Enrichment |
| BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007854 | Fip1_dom | 189 | 231 |
| No external refs found! |