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  5. PTI_13G03310.1

PTI_13G03310.1


Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0001369 (OrthoFinder) Phylogenetic Tree(s): OG0001369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_13G03310.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Dusal.0734s00005.1 33201571 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
EOD28122 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
Sro99_g050860.1 Contig1378.g12657 Probable ATP-dependent RNA helicase DDX6 (Fragment) 0.02 OrthoFinder
TP02G08300.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
Transcript_contig_54291 54291 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
Vocar.0049s0041.1 32886541 DEAD/DEAH box helicase domain; Helicase, C-terminal... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003756 protein disulfide isomerase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0005384 manganese ion transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005956 protein kinase CK2 complex IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0030026 cellular manganese ion homeostasis IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0034508 centromere complex assembly IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055071 manganese ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 272 378
IPR011545 DEAD/DEAH_box_helicase_dom 71 234
No external refs found!