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  5. PTI_13G02050.1

PTI_13G02050.1


Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0001185 (OrthoFinder) Phylogenetic Tree(s): OG0001185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_13G02050.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Cre01.g033832 30788674 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.04 OrthoFinder
Cre10.g436650 30789761 DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cz06g11130.t1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
OT_10G03270.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
Sro1441_g272930.1 Contig2512.g20550 Dependent RNA helicase 0.04 OrthoFinder
Sro730_g194000.1 Contig80.g832 Dependent RNA helicase 0.02 OrthoFinder
XM_002503395.1 MICPUN_59763, 59763 Helicase, C-terminal; K Homology domain, type 1;... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
MF GO:0015204 urea transmembrane transporter activity IEP Enrichment
BP GO:0015840 urea transport IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0019755 one-carbon compound transport IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0071918 urea transmembrane transport IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 170 352
IPR001650 Helicase_C 403 525
No external refs found!