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  5. PTI_12G02970.1

PTI_12G02970.1


Description : ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain; Vps4 oligomerisation, C-terminal [Interproscan].


Gene families : OG_01_0000074 (OrthoFinder) Phylogenetic Tree(s): OG0000074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_12G02970.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000655.31 tig00000655_g2857.t1 Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.01 OrthoFinder
OT_15G01910.1 No alias AAA ATPase, AAA+ lid domain; Vps4 oligomerisation,... 0.03 OrthoFinder
OT_15G01930.1 No alias ATPase, AAA-type, core [Interproscan]. 0.03 OrthoFinder
PTI_01G09400.1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.03 OrthoFinder
XM_003060221.1 MicpuC2_18879, 18879 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.01 OrthoFinder
lcl|LHPG02000023.1_cds_PRW20566.1_5469 PRW20566 ATPase family AAA domain-containing 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006595 polyamine metabolic process IEP Enrichment
BP GO:0006596 polyamine biosynthetic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008216 spermidine metabolic process IEP Enrichment
BP GO:0008295 spermidine biosynthetic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 636 677
IPR015415 Vps4_C 681 716
IPR003959 ATPase_AAA_core 483 613
No external refs found!