PTI_12G02220.1


Description : Hypothetical protein


Gene families : OG_01_0000066 (OrthoFinder) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_12G02220.1
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
PTI_00G00190.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G01000.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G01660.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_00G01920.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_00G02470.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G04610.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_01G05240.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_01G08070.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_03G05910.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_03G05930.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_03G05970.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_04G00260.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_05G04520.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_08G00150.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_08G00160.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_12G00290.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_13G00310.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.02 OrthoFinder
PTI_16G00080.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_16G00100.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_16G00750.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_16G02510.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.08 OrthoFinder
PTI_17G02300.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_20G00050.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_20G00060.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_20G00070.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_22G02670.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_24G00370.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_25G00030.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_29G00070.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!