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  5. PTI_12G02170.1

PTI_12G02170.1


Description : PiggyBac transposable element-derived protein [Interproscan].


Gene families : OG_01_0000462 (OrthoFinder) Phylogenetic Tree(s): OG0000462_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_12G02170.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
PTI_00G01990.1 No alias Hypothetical protein 0.21 OrthoFinder
PTI_01G05510.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_12G02430.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_12G03140.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_12G03170.1 No alias PiggyBac transposable element-derived protein [Interproscan]. 0.15 OrthoFinder
PTI_13G00230.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_13G00330.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_13G01420.1 No alias PiggyBac transposable element-derived protein [Interproscan]. 0.09 OrthoFinder
PTI_14G03190.1 No alias PiggyBac transposable element-derived protein [Interproscan]. 0.08 OrthoFinder
PTI_15G03040.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_15G03670.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_18G02890.1 No alias PiggyBac transposable element-derived protein [Interproscan]. 0.12 OrthoFinder
PTI_21G00020.1 No alias PiggyBac transposable element-derived protein [Interproscan]. 0.07 OrthoFinder
PTI_21G00030.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_24G01420.1 No alias Hypothetical protein 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEP Enrichment
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Enrichment
InterPro domains Description Start Stop
IPR029526 PGBD 15 141
No external refs found!