Description : tRNA-dihydrouridine synthase [Interproscan].
Gene families : OG_01_0001054 (OrthoFinder) Phylogenetic Tree(s): OG0001054_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: PTI_12G00560.1 | |
Cluster | HCCA: Cluster_62 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000241.80 | tig00000241_g20942.t1 | RNA processing.RNA modification.dihydrouridylation.tRNA... | 0.04 | OrthoFinder | |
Cre04.g229948 | 30791118 | RNA processing.RNA modification.dihydrouridylation.tRNA... | 0.04 | OrthoFinder | |
OT_10G01720.1 | No alias | tRNA-dihydrouridine synthase [Interproscan]. | 0.04 | OrthoFinder | |
Sro2255_g321010.1 | Contig1871.g16359 | Synthase | 0.02 | OrthoFinder | |
Sro767_g199550.1 | Contig2377.g19543 | Synthase | 0.06 | OrthoFinder | |
Transcript_contig_57299 | 57299 | tRNA-dihydrouridine synthase [Interproscan]. | 0.01 | OrthoFinder | |
Vocar.0001s1778.1 | 32885246 | E3 ligase, CCCH-type zinc finger; tRNA-dihydrouridine... | 0.02 | OrthoFinder | |
Vocar.0017s0070.1 | 32891389 | tRNA-dihydrouridine synthase [Interproscan]. | 0.03 | OrthoFinder | |
lcl|LHPG02000001.1_cds_PRW61399.1_401 | PRW61399 | TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0008033 | tRNA processing | IEA | Interproscan |
MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEA | Interproscan |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEA | Interproscan |
BP | GO:0055114 | obsolete oxidation-reduction process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003678 | DNA helicase activity | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | Enrichment |
MF | GO:0004386 | helicase activity | IEP | Enrichment |
MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
MF | GO:0005525 | GTP binding | IEP | Enrichment |
BP | GO:0006265 | DNA topological change | IEP | Enrichment |
MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Enrichment |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
MF | GO:0016887 | ATPase | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001269 | DUS_fam | 270 | 515 |
No external refs found! |