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  5. PTI_11G04470.1

PTI_11G04470.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000066 (OrthoFinder) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_11G04470.1
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
PTI_00G00190.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_00G01000.1 No alias Hypothetical protein 0.16 OrthoFinder
PTI_00G01600.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.11 OrthoFinder
PTI_00G01660.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_00G01920.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_00G02470.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G02490.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G04610.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_01G08070.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_01G11830.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_03G05880.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_03G05910.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_03G05930.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_03G05970.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_04G00260.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_05G04520.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_06G02350.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_08G00150.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_08G00160.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.1 OrthoFinder
PTI_09G01500.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_09G01520.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_09G01550.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_10G01700.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_11G00020.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_12G00290.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_16G00100.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_16G00750.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_16G02510.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.12 OrthoFinder
PTI_17G02300.1 No alias Hypothetical protein 0.17 OrthoFinder
PTI_18G02850.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_18G02870.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_20G00030.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_20G00050.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_20G00060.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_20G00070.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_20G00080.1 No alias Hypothetical protein 0.17 OrthoFinder
PTI_22G02670.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_24G00370.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_24G01870.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.1 OrthoFinder
PTI_25G00030.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_27G00070.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_29G00070.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 1304 1521
No external refs found!