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  5. PTI_11G03440.1

PTI_11G03440.1


Description : Pre-mRNA-splicing factor SLU7 domain [Interproscan].


Gene families : OG_01_0003323 (OrthoFinder) Phylogenetic Tree(s): OG0003323_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_11G03440.1
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000217.42 tig00000217_g19173.t1 Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre03.g194000 30787426 Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. indica 0.02 OrthoFinder
Cz01g38130.t1 No alias Pre-mRNA-splicing factor SLU7 domain [Interproscan]. 0.02 OrthoFinder
Dusal.0171s00012.1 33202856 Pre-mRNA-splicing factor SLU7 domain [Interproscan]. 0.02 OrthoFinder
EOD41716 No alias Pre-mRNA-splicing factor SLU7 domain [Interproscan]. 0.02 OrthoFinder
OT_14G00940.1 No alias Pre-mRNA-splicing factor SLU7 domain [Interproscan]. 0.02 OrthoFinder
XM_002505750.1 MICPUN_63712, 63712 Pre-mRNA-splicing factor SLU7 domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000649.1_cds_GFH13758.1_8235 HaLaN_09703, GFH13758 Slu7 domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33892.1_3106 PRW33892 Pre-mRNA-splicing factor SLU7 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004629 phospholipase C activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0031418 L-ascorbic acid binding IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043486 histone exchange IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR021715 Slu7_dom 193 484
No external refs found!