PTI_11G00930.1

Description : Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain; Clathrin/coatomer adaptor, adaptin-like, N-terminal [Interproscan].

Gene families : OG_01_0003545 (OrthoFinder) Phylogenetic Tree(s): OG0003545_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: PTI_11G00930.1
Cluster	HCCA: Cluster_102

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000217.33	tig00000217_g19167.t1	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.01	OrthoFinder
Cz08g32120.t1	No alias	Clathrin adaptor, alpha/beta/gamma-adaptin, appendage,...	0.02	OrthoFinder
EOD12161	No alias	Gamma-adaptin [Ensembl].	0.01	OrthoFinder
Sro196_g083470.1	Contig3206.g25343	AP-1 complex subunit gamma-1	0.04	OrthoFinder
Transcript_contig_55103	55103	Clathrin/coatomer adaptor, adaptin-like, N-terminal...	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Enrichment
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	Enrichment
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Enrichment
BP	GO:0006082	organic acid metabolic process	IEP	Enrichment
BP	GO:0006399	tRNA metabolic process	IEP	Enrichment
BP	GO:0006520	cellular amino acid metabolic process	IEP	Enrichment
MF	GO:0008092	cytoskeletal protein binding	IEP	Enrichment
MF	GO:0015631	tubulin binding	IEP	Enrichment
MF	GO:0016289	CoA hydrolase activity	IEP	Enrichment
MF	GO:0016790	thiolester hydrolase activity	IEP	Enrichment
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Enrichment
MF	GO:0016874	ligase activity	IEP	Enrichment
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Enrichment
BP	GO:0019752	carboxylic acid metabolic process	IEP	Enrichment
CC	GO:0030118	clathrin coat	IEP	Enrichment
CC	GO:0030120	vesicle coat	IEP	Enrichment
CC	GO:0030125	clathrin vesicle coat	IEP	Enrichment
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	Enrichment
CC	GO:0030132	clathrin coat of coated pit	IEP	Enrichment
BP	GO:0034660	ncRNA metabolic process	IEP	Enrichment
MF	GO:0043015	gamma-tubulin binding	IEP	Enrichment
BP	GO:0043038	amino acid activation	IEP	Enrichment
BP	GO:0043039	tRNA aminoacylation	IEP	Enrichment
BP	GO:0043436	oxoacid metabolic process	IEP	Enrichment
CC	GO:0098797	plasma membrane protein complex	IEP	Enrichment
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Enrichment
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002553	Clathrin/coatomer_adapt-like_N	22	623
IPR008152	Clathrin_a/b/g-adaptin_app_Ig	849	957

External Links

No external refs found!

PTI_11G00930.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation