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  5. PTI_11G00460.1

PTI_11G00460.1


Description : Cytochrome B6-F complex Fe-S subunit; Rieske [2Fe-2S] iron-sulphur domain [Interproscan].


Gene families : OG_01_0001581 (OrthoFinder) Phylogenetic Tree(s): OG0001581_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_11G00460.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000970.19 tig00000970_g5838.t1 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder
Cre11.g467689 30775730, PETC Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 OrthoFinder
Cz13g12160.t1 No alias Rieske [2Fe-2S] iron-sulphur domain; Cytochrome B6-F... 0.03 OrthoFinder
EOD17793 No alias Cytochrome B6-F complex Fe-S subunit; Rieske [2Fe-2S]... 0.05 OrthoFinder
OT_01G06660.1 No alias Rieske [2Fe-2S] iron-sulphur domain; Cytochrome B6-F... 0.09 OrthoFinder
Sro565_g167640.1 Contig2465.g20189 F complex iron-sulfur subunit 0.21 OrthoFinder
TP02G07910.1 No alias Cytochrome B6-F complex Fe-S subunit; Rieske [2Fe-2S]... 0.14 OrthoFinder
Transcript_contig_78467 78467 Cytochrome B6-F complex Fe-S subunit; Rieske [2Fe-2S]... 0.01 OrthoFinder
Vocar.0009s0349.1 32893192 Rieske [2Fe-2S] iron-sulphur domain; Cytochrome B6-F... 0.04 OrthoFinder
XM_002506874.1 MICPUN_88922, 88922 Cytochrome b6/f complex iron-sulfur subunit, chloroplast... 0.03 OrthoFinder
XM_003063058.1 MicpuC2_36185, 36185 Cytochrome b6/f complex iron-sulfur subunit, chloroplast... 0.04 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50973.1_1020 PRW50973 Cytochrome b6 f complex iron-sulfur chloroplast precursor 0.03 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491834.1_4842 KAA8491834 Cytochrome b6-f complex iron-sulfur subunit 1, cyanelle 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR017941 Rieske_2Fe-2S 117 180
No external refs found!