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  5. PTI_10G03500.1

PTI_10G03500.1


Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0002745 (OrthoFinder) Phylogenetic Tree(s): OG0002745_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_10G03500.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000018.1_cds_KAA8490847.1_5619 KAA8490847 Putative DEAD-box ATP-dependent RNA helicase 43 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004565 beta-galactosidase activity IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
CC GO:0009341 beta-galactosidase complex IEP Enrichment
MF GO:0015925 galactosidase activity IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 259 447
IPR001650 Helicase_C 485 591
No external refs found!