PTI_10G01010.1


Description : PDZ domain [Interproscan].


Gene families : OG_01_0010588 (OrthoFinder) Phylogenetic Tree(s): OG0010588_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_10G01010.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Sro2_g001530.1 Contig467.g6311 PDZ domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR001478 PDZ 716 782
No external refs found!