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Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].
Gene families : OG_01_0000022 (OrthoFinder) Phylogenetic Tree(s): OG0000022_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_10G00130.1 | |
| Cluster | HCCA: Cluster_59 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| PTI_00G00670.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_00G00790.1 | No alias | Hypothetical protein | 0.11 | OrthoFinder | |
| PTI_00G00820.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_00G00830.1 | No alias | Hypothetical protein | 0.09 | OrthoFinder | |
| PTI_00G01270.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_00G01930.1 | No alias | Hypothetical protein | 0.15 | OrthoFinder | |
| PTI_00G03290.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_00G03300.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_00G03380.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_00G03780.1 | No alias | Hypothetical protein | 0.11 | OrthoFinder | |
| PTI_00G03790.1 | No alias | Hypothetical protein | 0.19 | OrthoFinder | |
| PTI_01G04550.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_01G05400.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_02G00010.1 | No alias | Hypothetical protein | 0.22 | OrthoFinder | |
| PTI_03G04530.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_03G04540.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_03G04560.1 | No alias | Hypothetical protein | 0.09 | OrthoFinder | |
| PTI_04G00240.1 | No alias | Hypothetical protein | 0.14 | OrthoFinder | |
| PTI_05G00050.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_05G04500.1 | No alias | Hypothetical protein | 0.19 | OrthoFinder | |
| PTI_06G03550.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_06G03570.1 | No alias | Hypothetical protein | 0.17 | OrthoFinder | |
| PTI_07G04540.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_08G00930.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_08G04530.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_08G04540.1 | No alias | Hypothetical protein | 0.13 | OrthoFinder | |
| PTI_08G04560.1 | No alias | Hypothetical protein | 0.14 | OrthoFinder | |
| PTI_08G04590.1 | No alias | Hypothetical protein | 0.11 | OrthoFinder | |
| PTI_11G00010.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.15 | OrthoFinder | |
| PTI_11G00100.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_11G00110.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.05 | OrthoFinder | |
| PTI_11G00140.1 | No alias | Hypothetical protein | 0.15 | OrthoFinder | |
| PTI_11G04480.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_11G04530.1 | No alias | Hypothetical protein | 0.09 | OrthoFinder | |
| PTI_13G00100.1 | No alias | Hypothetical protein | 0.2 | OrthoFinder | |
| PTI_13G00110.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_13G00120.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_13G00130.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_13G00140.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.18 | OrthoFinder | |
| PTI_13G02530.1 | No alias | Hypothetical protein | 0.16 | OrthoFinder | |
| PTI_14G02460.1 | No alias | Hypothetical protein | 0.11 | OrthoFinder | |
| PTI_14G03550.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.14 | OrthoFinder | |
| PTI_16G00060.1 | No alias | Dehydrogenase, E1 component; Reverse transcriptase,... | 0.22 | OrthoFinder | |
| PTI_16G00070.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_17G02980.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.16 | OrthoFinder | |
| PTI_17G02990.1 | No alias | Hypothetical protein | 0.14 | OrthoFinder | |
| PTI_18G00060.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_18G00340.1 | No alias | Hypothetical protein | 0.1 | OrthoFinder | |
| PTI_18G00350.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_19G01420.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_19G01430.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_19G01440.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.06 | OrthoFinder | |
| PTI_19G02870.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_19G03130.1 | No alias | Hypothetical protein | 0.1 | OrthoFinder | |
| PTI_20G01800.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_20G02980.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_21G02780.1 | No alias | Hypothetical protein | 0.1 | OrthoFinder | |
| PTI_22G00420.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_22G00430.1 | No alias | Hypothetical protein | 0.2 | OrthoFinder | |
| PTI_25G00010.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.02 | OrthoFinder | |
| PTI_26G00300.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_26G00310.1 | No alias | Hypothetical protein | 0.16 | OrthoFinder | |
| PTI_27G00020.1 | No alias | Hypothetical protein | 0.17 | OrthoFinder | |
| PTI_29G00100.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.06 | OrthoFinder | |
| PTI_29G00120.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_29G00130.1 | No alias | Hypothetical protein | 0.11 | OrthoFinder | |
| PTI_29G00620.1 | No alias | Hypothetical protein | 0.08 | OrthoFinder | |
| PTI_29G01340.1 | No alias | Hypothetical protein | 0.11 | OrthoFinder | |
| PTI_30G00040.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_30G00100.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_31G00130.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.15 | OrthoFinder | |
| PTI_31G00140.1 | No alias | Hypothetical protein | 0.11 | OrthoFinder | |
| PTI_31G00160.1 | No alias | Hypothetical protein | 0.17 | OrthoFinder | |
| PTI_31G00170.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_33G00260.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.16 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
| BP | GO:0015074 | DNA integration | IEP | Enrichment |
| MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013103 | RVT_2 | 1310 | 1534 |
| No external refs found! |