Description : Helicase, C-terminal; High mobility group box domain; SLIDE domain; SNF2-related, N-terminal domain [Interproscan].
Gene families : OG_01_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: PTI_10G00070.1 | |
Cluster | HCCA: Cluster_53 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000217.25 | tig00000217_g19158.t1 | Chromatin structure-remodeling complex protein SYD... | 0.01 | OrthoFinder | |
Cpa|evm.model.tig00000350.9 | tig00000350_g24309.t1 | CHD3-type chromatin-remodeling factor PICKLE... | 0.02 | OrthoFinder | |
Cpa|evm.model.tig00020960.24 | tig00020960_g16545.t1 | Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
Cre03.g179300 | 30786668 | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | OrthoFinder | |
Cre08.g377200 | 30773522 | CHD3-type chromatin-remodeling factor PICKLE... | 0.02 | OrthoFinder | |
Cre09.g390000 | 30781417 | RNA biosynthesis.transcriptional activation.PHD finger... | 0.02 | OrthoFinder | |
Cre16.g647602 | 30777036 | ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
Cz05g37180.t1 | No alias | SNF2-related, N-terminal domain; Helicase, C-terminal... | 0.03 | OrthoFinder | |
Cz19g07040.t1 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain;... | 0.03 | OrthoFinder | |
Dusal.0024s00040.1 | 33202173 | SNF2-related, N-terminal domain [Interproscan]. | 0.03 | OrthoFinder | |
Dusal.0357s00004.1 | 33189829 | SNF2-related, N-terminal domain; Helicase, C-terminal;... | 0.02 | OrthoFinder | |
Dusal.0752s00003.1 | 33199467 | HEAT-like repeat [Interproscan]. | 0.02 | OrthoFinder | |
EOD17057 | No alias | Chromodomain helicase DNA binding protein [Ensembl]. | 0.03 | OrthoFinder | |
EOD23118 | No alias | SNF2-related, N-terminal domain [Interproscan]. | 0.02 | OrthoFinder | |
EOD25651 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.02 | OrthoFinder | |
EOD28310 | No alias | Chromodomain helicase DNA binding protein [Ensembl]. | 0.03 | OrthoFinder | |
EOD36957 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.02 | OrthoFinder | |
EOD37625 | No alias | Helicase, C-terminal; Zinc finger, PHD-finger;... | 0.01 | OrthoFinder | |
EOD38452 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.03 | OrthoFinder | |
EOD39269 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.01 | OrthoFinder | |
EOD41956 | No alias | Chromo domain; Helicase, C-terminal; SNF2-related,... | 0.02 | OrthoFinder | |
OT_11G00460.1 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain;... | 0.03 | OrthoFinder | |
Sro125_g060200.1 | Contig2833.g22731 | Chromodomain-helicase-DNA-binding protein | 0.02 | OrthoFinder | |
Sro19_g013190.1 | Contig446.g5983 | CHD3-type chromatin-remodeling factor | 0.03 | OrthoFinder | |
Sro272_g104840.1 | Contig2144.g18025 | Chromodomain-helicase-DNA-binding protein | 0.1 | OrthoFinder | |
Sro29_g019150.1 | Contig1384.g12758 | CHD3-type chromatin-remodeling factor CHR7 | 0.03 | OrthoFinder | |
Sro2_g001340.1 | Contig467.g6292 | CHD3-type chromatin-remodeling factor PICKLE | 0.06 | OrthoFinder | |
Sro358_g125960.1 | Contig1210.g11383 | Probable chromatin-remodeling complex ATPase chain | 0.04 | OrthoFinder | |
Sro463_g148220.1 | Contig3968.g30431 | Probable chromatin-remodeling complex ATPase chain | 0.02 | OrthoFinder | |
Sro566_g167850.1 | Contig3739.g28680 | ISWI chromatin-remodeling complex ATPase ISW2 | 0.06 | OrthoFinder | |
Sro847_g210300.1 | Contig4605.g34375 | CHD3-type chromatin-remodeling factor | 0.02 | OrthoFinder | |
TP07G00550.1 | No alias | SNF2-related, N-terminal domain; Helicase, C-terminal... | 0.03 | OrthoFinder | |
TP11G02170.1 | No alias | SNF2-related, N-terminal domain; Chromo domain;... | 0.04 | OrthoFinder | |
Vocar.0021s0108.1 | 32895927 | SNF2-related, N-terminal domain [Interproscan]. | 0.02 | OrthoFinder | |
XM_002509111.1 | MICPUN_62843, 62843 | SNF2 super family | 0.03 | OrthoFinder | |
XM_003061151.1 | MicpuC2_60694, 60694 | SNF2 super family | 0.02 | OrthoFinder | |
XM_003064054.1 | MicpuC2_54122, 54122 | SNF2 super family | 0.02 | OrthoFinder | |
lcl|BLLF01001410.1_cds_GFH19126.1_13603 | HaLaN_16027, GFH19126 | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.02 | OrthoFinder | |
lcl|BLLF01003574.1_cds_GFH27683.1_22160 | HaLaN_26047, GFH27683 | SNF2-related, N-terminal domain [Interproscan]. | 0.01 | OrthoFinder | |
lcl|BLLF01003728.1_cds_GFH28065.1_22542 | HaLaN_26485, GFH28065 | Helicase ATP-binding domain-containing protein | 0.01 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495718.1_1716 | KAA8495718 | Chromodomain-helicase-DNA-binding protein 2 | 0.01 | OrthoFinder | |
lcl|VRMN01000008.1_cds_KAA8492942.1_2678 | KAA8492942 | TATA-binding protein-associated factor | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006338 | chromatin remodeling | IEA | Interproscan |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | Enrichment |
MF | GO:0003774 | motor activity | IEP | Enrichment |
MF | GO:0003896 | DNA primase activity | IEP | Enrichment |
MF | GO:0004402 | histone acetyltransferase activity | IEP | Enrichment |
MF | GO:0004559 | alpha-mannosidase activity | IEP | Enrichment |
MF | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | IEP | Enrichment |
MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
BP | GO:0006473 | protein acetylation | IEP | Enrichment |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | Enrichment |
BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
BP | GO:0006887 | exocytosis | IEP | Enrichment |
BP | GO:0008104 | protein localization | IEP | Enrichment |
MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
BP | GO:0009966 | regulation of signal transduction | IEP | Enrichment |
BP | GO:0010646 | regulation of cell communication | IEP | Enrichment |
BP | GO:0015031 | protein transport | IEP | Enrichment |
MF | GO:0015923 | mannosidase activity | IEP | Enrichment |
MF | GO:0015924 | mannosyl-oligosaccharide mannosidase activity | IEP | Enrichment |
BP | GO:0016192 | vesicle-mediated transport | IEP | Enrichment |
BP | GO:0016197 | endosomal transport | IEP | Enrichment |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Enrichment |
CC | GO:0016459 | myosin complex | IEP | Enrichment |
MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
BP | GO:0016482 | cytosolic transport | IEP | Enrichment |
BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
BP | GO:0016570 | histone modification | IEP | Enrichment |
BP | GO:0016573 | histone acetylation | IEP | Enrichment |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Enrichment |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Enrichment |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Enrichment |
BP | GO:0023051 | regulation of signaling | IEP | Enrichment |
CC | GO:0030117 | membrane coat | IEP | Enrichment |
CC | GO:0030126 | COPI vesicle coat | IEP | Enrichment |
CC | GO:0030906 | retromer, cargo-selective complex | IEP | Enrichment |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | Enrichment |
BP | GO:0032940 | secretion by cell | IEP | Enrichment |
CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Enrichment |
MF | GO:0035091 | phosphatidylinositol binding | IEP | Enrichment |
BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Enrichment |
MF | GO:0043169 | cation binding | IEP | Enrichment |
MF | GO:0043531 | ADP binding | IEP | Enrichment |
BP | GO:0043543 | protein acylation | IEP | Enrichment |
BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Enrichment |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | Enrichment |
MF | GO:0046872 | metal ion binding | IEP | Enrichment |
BP | GO:0046903 | secretion | IEP | Enrichment |
BP | GO:0046907 | intracellular transport | IEP | Enrichment |
BP | GO:0048583 | regulation of response to stimulus | IEP | Enrichment |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | Enrichment |
BP | GO:0051641 | cellular localization | IEP | Enrichment |
BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Enrichment |
BP | GO:0071702 | organic substance transport | IEP | Enrichment |
BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
BP | GO:0140352 | export from cell | IEP | Enrichment |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | Enrichment |
No external refs found! |