1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_09G03720.1

PTI_09G03720.1


Description : Ubiquitin-conjugating enzyme E2 [Interproscan].


Gene families : OG_01_0000421 (OrthoFinder) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_09G03720.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Cre06.g292800 30779532 Protein degradation.peptide... 0.03 OrthoFinder
Cre16.g693700 30777449, UBC9 Protein degradation.peptide... 0.02 OrthoFinder
Cz09g17240.t1 No alias Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.04 OrthoFinder
TP04G00210.1 No alias Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.02 OrthoFinder
Vocar.0063s0025.1 32883460 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.03 OrthoFinder
XM_003056887.1 MicpuC2_46797, 46797 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000796.1_cds_GFH15024.1_9501 HaLaN_11175, GFH15024 Ubiquitin-conjugating enzyme E2 28-like 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0005375 copper ion transmembrane transporter activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Enrichment
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Enrichment
BP GO:0006825 copper ion transport IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016255 attachment of GPI anchor to protein IEP Enrichment
CC GO:0030008 TRAPP complex IEP Enrichment
BP GO:0035434 copper ion transmembrane transport IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 10 144
No external refs found!