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  5. PTI_09G03220.1

PTI_09G03220.1


Description : Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain; Prolyl 3,4-dihydroxylase TPA1/OFD1, N-terminal domain [Interproscan].


Gene families : OG_01_0003428 (OrthoFinder) Phylogenetic Tree(s): OG0003428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_09G03220.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cz14g26010.t1 No alias Prolyl 3,4-dihydroxylase TPA1/OFD1, N-terminal domain;... 0.07 OrthoFinder
Dusal.0016s00018.1 33193065 Prolyl 3,4-dihydroxylase TPA1/OFD1, N-terminal domain;... 0.05 OrthoFinder
Sro968_g226040.1 Contig1973.g16879 Prolyl 3,4-dihydroxylase OGFOD1 0.02 OrthoFinder
XM_002499987.1 MICPUN_56205, 56205 Prolyl 3,4-dihydroxylase TPA1/OFD1, N-terminal domain;... 0.06 OrthoFinder
XM_003057849.1 MicpuC2_2294, 2294 Oxoglutarate/iron-dependent oxygenase, C-terminal... 0.02 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492330.1_5513 KAA8492330 Prolyl 3,4-dihydroxylase OGFOD1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEA Interproscan
MF GO:0031418 L-ascorbic acid binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR039558 TPA1/OFD1_N 158 262
IPR019601 Oxoglutarate/Fe-dep_Oase_C 313 575
No external refs found!