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  5. PTI_09G03200.1

PTI_09G03200.1


Description : AP complex, mu/sigma subunit [Interproscan].


Gene families : OG_01_0000426 (OrthoFinder) Phylogenetic Tree(s): OG0000426_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_09G03200.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
EOD06805 No alias Aps1, sigma subunit of the adaptin 1 complex [Ensembl]. 0.02 OrthoFinder
Sro782_g201730.1 Contig2391.g19597 AP-2 complex subunit sigma 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0005375 copper ion transmembrane transporter activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006825 copper ion transport IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
BP GO:0035434 copper ion transmembrane transport IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 22 158
No external refs found!