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  5. PTI_09G01640.1

PTI_09G01640.1


Description : Zinc finger, RING-CH-type; Forkhead-associated (FHA) domain [Interproscan].


Gene families : OG_01_0000217 (OrthoFinder) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_09G01640.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Sro281_g107280.1 Contig3786.g29067 Protein ligase MARCH7 0.01 OrthoFinder
Sro364_g127030.1 Contig2146.g18054 Protein ligase MARCH5 0.01 OrthoFinder
Vocar.0039s0083.1 32897810 Zinc finger, RING-CH-type [Interproscan]. 0.01 OrthoFinder
XM_003055876.1 MicpuC2_38422, 38422 Zinc finger, RING-CH-type [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498088.1_7041 KAA8498088 E3 ubiquitin-protein ligase MARCH8 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495204.1_1202 KAA8495204 E3 ubiquitin-protein ligase MARCH8 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006635 fatty acid beta-oxidation IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
BP GO:0009062 fatty acid catabolic process IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
BP GO:0019395 fatty acid oxidation IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0033539 fatty acid beta-oxidation using acyl-CoA dehydrogenase IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0034440 lipid oxidation IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0044242 cellular lipid catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
MF GO:0061608 nuclear import signal receptor activity IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
CC GO:1902554 serine/threonine protein kinase complex IEP Enrichment
CC GO:1902911 protein kinase complex IEP Enrichment
CC GO:1990316 Atg1/ULK1 kinase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000253 FHA_dom 610 665
IPR011016 Znf_RING-CH 485 530
No external refs found!