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Description : Formin, FH2 domain [Interproscan].
Gene families : OG_01_0000242 (OrthoFinder) Phylogenetic Tree(s): OG0000242_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_09G01320.1 | |
| Cluster | HCCA: Cluster_20 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020961.51 | tig00020961_g16673.t1 | Formin-like protein 18 OS=Arabidopsis thaliana | 0.01 | OrthoFinder | |
| Cre03.g166700 | 30787105, FOR1 | Formin-like protein 12 OS=Oryza sativa subsp. japonica | 0.01 | OrthoFinder | |
| Cre06.g311250 | 30779791 | No description available | 0.01 | OrthoFinder | |
| OT_06G01350.1 | No alias | Formin, FH2 domain; Rho GTPase-activating protein domain... | 0.02 | OrthoFinder | |
| Sro1229_g254470.1 | Contig3654.g28211 | Disheveled-associated activator of morphogenesis 1 | 0.02 | OrthoFinder | |
| Sro964_g225470.1 | Contig2151.g18109 | Formin-like protein | 0.05 | OrthoFinder | |
| SymbC1.scaffold8863.1 | 8863.1 | Peptidyl-prolyl cis-trans isomerase, PpiC-type; Formin,... | 0.01 | OrthoFinder | |
| TP10G01100.1 | No alias | WASH complex subunit 3; Formin, FH2 domain [Interproscan]. | 0.05 | OrthoFinder | |
| TP22G00600.1 | No alias | Formin, FH2 domain [Interproscan]. | 0.03 | OrthoFinder | |
| Transcript_contig_10150 | 10150 | Hypothetical protein | 0.02 | OrthoFinder | |
| Transcript_contig_56345 | 56345 | Formin, FH2 domain [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0001s1807.1 | 32884548 | Pleckstrin homology domain; Formin, FH2 domain [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003059141.1 | MicpuC2_27253, 27253 | Formin, FH2 domain [Interproscan]. | 0.03 | OrthoFinder | |
| lcl|LHPG02000017.1_cds_PRW33313.1_3536 | PRW33313 | Formin 20 | 0.02 | OrthoFinder | |
| lcl|VRMN01000002.1_cds_KAA8496590.1_319 | KAA8496590 | Formin-like protein 20 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | Enrichment |
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0004525 | ribonuclease III activity | IEP | Enrichment |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| BP | GO:0006887 | exocytosis | IEP | Enrichment |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Enrichment |
| BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Enrichment |
| MF | GO:0017069 | snRNA binding | IEP | Enrichment |
| MF | GO:0017070 | U6 snRNA binding | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0030623 | U5 snRNA binding | IEP | Enrichment |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0032940 | secretion by cell | IEP | Enrichment |
| MF | GO:0034061 | DNA polymerase activity | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| MF | GO:0043531 | ADP binding | IEP | Enrichment |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| BP | GO:0046903 | secretion | IEP | Enrichment |
| BP | GO:0051169 | nuclear transport | IEP | Enrichment |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
| CC | GO:0071203 | WASH complex | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| BP | GO:0140352 | export from cell | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR015425 | FH2_Formin | 582 | 958 |
| No external refs found! |