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  5. PTI_08G04480.1

PTI_08G04480.1


Description : Helicase-associated [Interproscan].


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_08G04480.1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Sro1025_g232780.1 Contig568.g7229 Helicase 0.02 OrthoFinder
Sro1285_g259300.1 Contig851.g9358 Helicase 0.04 OrthoFinder
Sro147_g067740.1 Contig246.g2997 Helicase 0.02 OrthoFinder
Sro18_g012910.1 Contig1351.g12451 Helicase 0.02 OrthoFinder
Sro311_g114300.1 Contig909.g9545 Helicase 0.02 OrthoFinder
Sro8_g006870.1 Contig89.g1000 Helicase 0.02 OrthoFinder
TP08G01430.1 No alias Helicase-associated [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
MF GO:0008131 primary amine oxidase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0048038 quinone binding IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 320 386
IPR005114 Helicase_assoc 151 212
IPR005114 Helicase_assoc 234 300
No external refs found!