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  5. PTI_08G03550.1

PTI_08G03550.1


Description : Photosystem II PsbO, manganese-stabilising [Interproscan].


Gene families : OG_01_0001803 (OrthoFinder) Phylogenetic Tree(s): OG0001803_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_08G03550.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020911.42 tig00020911_g15745.t1 Oxygen-evolving enhancer protein 1, chloroplastic... 0.02 OrthoFinder
Cpa|evm.model.tig00020911.43 tig00020911_g15745.t1 Oxygen-evolving enhancer protein 1, chloroplastic... 0.03 OrthoFinder
Cre09.g396213 30780284, PSBO Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.07 OrthoFinder
Cz16g19040.t1 No alias Photosystem II PsbO, manganese-stabilising [Interproscan]. 0.09 OrthoFinder
EOD09025 No alias Oxygen-evolving enhancer protein 1 of photosystem II [Ensembl]. 0.08 OrthoFinder
OT_14G00180.1 No alias Photosystem II PsbO, manganese-stabilising [Interproscan]. 0.05 OrthoFinder
Sro852_g211010.1 Contig107.g1243 Enhancer protein 1, chloroplastic 0.23 OrthoFinder
SymbC1.scaffold52.5 52.5 Photosystem II PsbO, manganese-stabilising [Interproscan]. 0.02 OrthoFinder
TP06G06720.1 No alias Photosystem II PsbO, manganese-stabilising [Interproscan]. 0.18 OrthoFinder
Transcript_contig_58678 58678 Photosystem II PsbO, manganese-stabilising [Interproscan]. 0.01 OrthoFinder
Vocar.0009s0198.1 32893184 Photosystem II PsbO, manganese-stabilising [Interproscan]. 0.02 OrthoFinder
XM_002505763.1 MICPUN_92317, 92317 Photosystem II manganese-stabilizing polypeptide (PSBO) 0.02 OrthoFinder
XM_003063805.1 MicpuC2_48994, 48994 Photosystem II manganese-stabilizing polypeptide (PSBO) 0.02 OrthoFinder
lcl|BLLF01004367.1_cds_GFH29477.1_23954 HaLaN_28140, GFH29477 Photosystem II PsbO, manganese-stabilising [Interproscan]. 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497770.1_6723 KAA8497770 Oxygen-evolving enhancer protein 1, chloroplastic 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0010207 photosystem II assembly IEA Interproscan
MF GO:0010242 oxygen evolving activity IEA Interproscan
BP GO:0042549 photosystem II stabilization IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008883 glutamyl-tRNA reductase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
BP GO:0010024 phytochromobilin biosynthetic process IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0050897 cobalt ion binding IEP Enrichment
BP GO:0051202 phytochromobilin metabolic process IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002628 PSII_MSP 69 307
No external refs found!