- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : TRAM/LAG1/CLN8 homology domain [Interproscan].
Gene families : OG_01_0019965 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_08G03380.1 | |
| Cluster | HCCA: Cluster_80 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro31_g020290.1 | Contig420.g5624 | TRAM/LAG1/CLN8 homology domain [Interproscan]. | 0.02 | OrthoFinder | |
| TP07G02410.1 | No alias | TRAM/LAG1/CLN8 homology domain [Interproscan]. | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | Enrichment |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | Enrichment |
| MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0006629 | lipid metabolic process | IEP | Enrichment |
| BP | GO:0006826 | iron ion transport | IEP | Enrichment |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Enrichment |
| BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | Enrichment |
| MF | GO:0016746 | acyltransferase activity | IEP | Enrichment |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Enrichment |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
| MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | Enrichment |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Enrichment |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Enrichment |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Enrichment |
| BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | Enrichment |
| BP | GO:0034755 | iron ion transmembrane transport | IEP | Enrichment |
| BP | GO:0043038 | amino acid activation | IEP | Enrichment |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0070569 | uridylyltransferase activity | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006634 | TLC-dom | 133 | 292 |
| No external refs found! |