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  5. PTI_08G01240.1

PTI_08G01240.1


Description : CidB/LrgB family [Interproscan].


Gene families : OG_01_0001146 (OrthoFinder) Phylogenetic Tree(s): OG0001146_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_08G01240.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000912.1 tig00000912_g5408.t2 Solute transport.carrier-mediated transport.PLGG1... 0.02 OrthoFinder
Cre09.g394850 30780576, TEF24 Solute transport.carrier-mediated transport.PLGG1... 0.02 OrthoFinder
Cz05g29240.t1 No alias CidB/LrgB family [Interproscan]. 0.05 OrthoFinder
OT_01G06140.1 No alias CidB/LrgB family [Interproscan]. 0.03 OrthoFinder
Sro661_g183130.1 Contig401.g5413 Plastidal glycolate/glycerate translocator 1, chloroplastic 0.03 OrthoFinder
TP07G04080.1 No alias CidB/LrgB family [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01000928.1_cds_GFH15973.1_10450 HaLaN_12311, GFH15973 Hypothetical protein 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8500001.1_8954 KAA8500001 Plastidal glycolate/glycerate translocator 1, chloroplastic 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495501.1_1499 KAA8495501 Plastidal glycolate/glycerate translocator 1, chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR007300 CidB/LrgB 265 493
No external refs found!