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  5. PTI_08G00160.1

PTI_08G00160.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000066 (OrthoFinder) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_08G00160.1
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
PTI_00G01000.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_00G01650.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G01920.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.17 OrthoFinder
PTI_00G02190.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_00G02200.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_00G02470.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_00G04600.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_00G04610.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_01G01660.1 No alias Hypothetical protein 0.19 OrthoFinder
PTI_01G05240.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_01G08060.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_01G08070.1 No alias Hypothetical protein 0.25 OrthoFinder
PTI_01G08080.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_01G11800.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_03G00500.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.14 OrthoFinder
PTI_03G00510.1 No alias Hypothetical protein 0.18 OrthoFinder
PTI_03G05880.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_03G05910.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_03G05920.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_03G05950.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_03G05970.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_04G00260.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_06G01810.1 No alias Hypothetical protein 0.16 OrthoFinder
PTI_06G02350.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_06G03610.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.09 OrthoFinder
PTI_09G00400.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.17 OrthoFinder
PTI_09G01520.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.16 OrthoFinder
PTI_09G01550.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_09G01560.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_09G02870.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_11G04470.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.1 OrthoFinder
PTI_12G00290.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_12G02120.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_12G02220.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_12G02230.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_16G00080.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_16G00750.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.2 OrthoFinder
PTI_16G02500.1 No alias Hypothetical protein 0.19 OrthoFinder
PTI_16G02510.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.12 OrthoFinder
PTI_17G02300.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_18G00100.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.11 OrthoFinder
PTI_18G01250.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.17 OrthoFinder
PTI_18G02840.1 No alias Hypothetical protein 0.18 OrthoFinder
PTI_18G02920.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.14 OrthoFinder
PTI_19G03110.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.13 OrthoFinder
PTI_20G00080.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_24G00370.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_24G01650.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_25G00030.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_29G00070.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_29G00090.1 No alias Glycoside hydrolase family 1; Reverse transcriptase,... 0.02 OrthoFinder
PTI_31G00090.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.17 OrthoFinder
PTI_31G00950.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_33G00250.1 No alias Hypothetical protein 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 546 677
No external refs found!