PTI_07G04100.1

Description : PiggyBac transposable element-derived protein; HAT (Half-A-TPR) repeat [Interproscan].

Gene families : OG_01_0001985 (OrthoFinder) Phylogenetic Tree(s): OG0001985_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: PTI_07G04100.1
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
Cre14.g621000	30776341	RNA processing.RNA splicing.spliceosome-associated...	0.01	OrthoFinder
EOD31622	No alias	Hypothetical protein [Ensembl].	0.02	OrthoFinder
EOD40093	No alias	HAT (Half-A-TPR) repeat [Interproscan].	0.04	OrthoFinder
OT_07G03650.1	No alias	HAT (Half-A-TPR) repeat [Interproscan].	0.02	OrthoFinder
TP06G04810.1	No alias	Suppressor of forked [Interproscan].	0.04	OrthoFinder
Transcript_contig_56548	56548	HAT (Half-A-TPR) repeat [Interproscan].	0.02	OrthoFinder
Vocar.0004s0261.1	32889891	HAT (Half-A-TPR) repeat [Interproscan].	0.02	OrthoFinder
XM_002502037.1	MICPUN_97374, 97374	Tetratricopeptide repeat; HAT (Half-A-TPR) repeat [Interproscan].	0.02	OrthoFinder
lcl\|BLLF01006138.1_cds_GFH31989.1_26466	HaLaN_31131, GFH31989	HAT (Half-A-TPR) repeat [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Enrichment
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Enrichment
MF	GO:0004620	phospholipase activity	IEP	Enrichment
MF	GO:0004629	phospholipase C activity	IEP	Enrichment
CC	GO:0005634	nucleus	IEP	Enrichment
BP	GO:0006338	chromatin remodeling	IEP	Enrichment
BP	GO:0006364	rRNA processing	IEP	Enrichment
BP	GO:0006414	translational elongation	IEP	Enrichment
MF	GO:0008176	tRNA (guanine-N7-)-methyltransferase activity	IEP	Enrichment
MF	GO:0008408	3'-5' exonuclease activity	IEP	Enrichment
BP	GO:0016072	rRNA metabolic process	IEP	Enrichment
MF	GO:0016298	lipase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Enrichment
MF	GO:0034061	DNA polymerase activity	IEP	Enrichment
BP	GO:0034470	ncRNA processing	IEP	Enrichment
BP	GO:0034660	ncRNA metabolic process	IEP	Enrichment
BP	GO:0034728	nucleosome organization	IEP	Enrichment
BP	GO:0043044	ATP-dependent chromatin remodeling	IEP	Enrichment
CC	GO:0043227	membrane-bounded organelle	IEP	Enrichment
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Enrichment
BP	GO:0043486	histone exchange	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR029526	PGBD	233	620
IPR003107	HAT	859	889

External Links

No external refs found!