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Description : Snf7 family [Interproscan].
Gene families : OG_01_0003320 (OrthoFinder) Phylogenetic Tree(s): OG0003320_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_07G00050.1 | |
| Cluster | HCCA: Cluster_35 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020554.72 | tig00020554_g10852.t1 | Vesicle trafficking.endomembrane trafficking.ESCRT... | 0.02 | OrthoFinder | |
| Cz01g16250.t1 | No alias | Snf7 family [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_59252 | 59252 | Snf7 family [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0011s0220.1 | 32895408 | Snf7 family [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003062974.1 | MicpuC2_49728, 49728 | Snf7 family [Interproscan]. | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0007034 | vacuolar transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005576 | extracellular region | IEP | Enrichment |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Enrichment |
| BP | GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0006490 | oligosaccharide-lipid intermediate biosynthetic process | IEP | Enrichment |
| BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
| MF | GO:0008061 | chitin binding | IEP | Enrichment |
| MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Enrichment |
| CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
| BP | GO:0051668 | localization within membrane | IEP | Enrichment |
| BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005024 | Snf7_fam | 14 | 177 |
| No external refs found! |