Description : Chaperonin Cpn60/TCP-1 family [Interproscan].
Gene families : OG_01_0002508 (OrthoFinder) Phylogenetic Tree(s): OG0002508_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: PTI_06G05110.1 | |
Cluster | HCCA: Cluster_116 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre10.g439100 | 30790162, CCT1 | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.02 | OrthoFinder | |
lcl|LHPG02000028.1_cds_PRW05817.1_5977 | PRW05817 | T-complex 1 subunit alpha | 0.02 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495837.1_1835 | KAA8495837 | T-complex protein 1 subunit alpha | 0.02 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494500.1_3030 | KAA8494500 | T-complex protein 1 subunit alpha | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Enrichment |
MF | GO:0003824 | catalytic activity | IEP | Enrichment |
MF | GO:0003848 | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity | IEP | Enrichment |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
MF | GO:0005525 | GTP binding | IEP | Enrichment |
BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Enrichment |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | Enrichment |
BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
MF | GO:0016778 | diphosphotransferase activity | IEP | Enrichment |
MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Enrichment |
MF | GO:0016874 | ligase activity | IEP | Enrichment |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
CC | GO:0030684 | preribosome | IEP | Enrichment |
CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Enrichment |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0043038 | amino acid activation | IEP | Enrichment |
BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002423 | Cpn60/TCP-1 | 32 | 545 |
No external refs found! |