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  5. PTI_06G04540.1

PTI_06G04540.1


Description : TRAPP II complex, Trs120 [Interproscan].


Gene families : OG_01_0019877 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_06G04540.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Sro1100_g241320.1 Contig937.g9744 ATP-dependent microtubule severing protein. Microtubule... 0.04 OrthoFinder
TP15G01600.1 No alias ATPase, AAA-type, core; TRAPP II complex, Trs120 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004629 phospholipase C activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
CC GO:0030906 retromer, cargo-selective complex IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0043531 ADP binding IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR013935 TRAPP_II_complex_Trs120 317 538
No external refs found!