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  5. PTI_06G00650.1

PTI_06G00650.1


Description : ABC transporter-like; ABC-2 type transporter [Interproscan].


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_06G00650.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020902.3 tig00020902_g14946.t1 ABC transporter G family member 5 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder
Cre07.g327800 30775067 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cz03g01010.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Sro2078_g313670.1 Contig3499.g27148 Putative white-brown complex homolog protein 30 0.02 OrthoFinder
Sro223_g091300.1 Contig370.g4999 Putative white-brown complex homolog protein 30 0.01 OrthoFinder
Sro3204_g345200.1 Contig537.g6976 Putative white-brown complex homolog protein 30 0.01 OrthoFinder
Sro351_g123960.1 Contig4381.g32950 Putative white-brown complex homolog protein 30 0.03 OrthoFinder
Sro380_g130710.1 Contig3948.g30263 Putative white-brown complex homolog protein 30 0.02 OrthoFinder
SymbC1.scaffold1118.4 1118.4 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold193.5 193.5 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Transcript_contig_54121 54121 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004071 aspartate-ammonia ligase activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016714 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 59 206
IPR013525 ABC_2_trans 336 531
No external refs found!