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  5. PTI_05G03970.1

PTI_05G03970.1


Description : High mobility group box domain; FACT complex subunit POB3-like, N-terminal PH domain; Domain of unknown function DUF1747; SSRP1 domain; Aminotransferase class-III [Interproscan].


Gene families : OG_01_0001888 (OrthoFinder) Phylogenetic Tree(s): OG0001888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_05G03970.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
OT_14G01280.1 No alias SSRP1 domain; High mobility group box domain; Domain of... 0.02 OrthoFinder
Vocar.0001s0906.1 32884654 High mobility group box domain; Domain of unknown... 0.01 OrthoFinder
lcl|BLLF01000193.1_cds_GFH08901.1_3378 HaLaN_03943, GFH08901 FACT complex subunit SSRP1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004629 phospholipase C activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0030173 integral component of Golgi membrane IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031228 intrinsic component of Golgi membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0042393 histone binding IEP Enrichment
MF GO:0043531 ADP binding IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR005814 Aminotrans_3 158 436
IPR009071 HMG_box_dom 1281 1349
IPR009071 HMG_box_dom 1367 1435
IPR009071 HMG_box_dom 1188 1256
IPR024954 SSRP1_dom 742 792
IPR013719 DUF1747 970 1067
IPR035417 POB3_N 606 699
No external refs found!