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  5. PTI_05G02680.1

PTI_05G02680.1


Description : UmuC domain; DNA polymerase, Y-family, little finger domain [Interproscan].


Gene families : OG_01_0000380 (OrthoFinder) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_05G02680.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Cz10g08260.t1 No alias Zinc-finger domain of monoamine-oxidase A repressor R1... 0.02 OrthoFinder
EOD41045 No alias JmjC domain [Interproscan]. 0.02 OrthoFinder
Sro88_g046710.1 Contig265.g3329 DNA polymerase eta 0.02 OrthoFinder
TP09G02630.1 No alias UmuC domain; SAC3/GANP/THP3 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78490 78490 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
CC GO:0000145 exocyst IEP Enrichment
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0003964 RNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0004526 ribonuclease P activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004560 alpha-L-fucosidase activity IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006077 (1->6)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006078 (1->6)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006474 N-terminal protein amino acid acetylation IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006595 polyamine metabolic process IEP Enrichment
BP GO:0006596 polyamine biosynthetic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0008216 spermidine metabolic process IEP Enrichment
BP GO:0008295 spermidine biosynthetic process IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
MF GO:0015928 fucosidase activity IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016843 amine-lyase activity IEP Enrichment
MF GO:0016844 strictosidine synthase activity IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Enrichment
BP GO:0018206 peptidyl-methionine modification IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Enrichment
CC GO:0031417 NatC complex IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR017961 DNA_pol_Y-fam_little_finger 392 513
IPR001126 UmuC 41 299
No external refs found!