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  5. PTI_05G01720.1

PTI_05G01720.1


Description : Zinc finger, C3HC4 type (RING finger) [Interproscan].


Gene families : OG_01_0006525 (OrthoFinder) Phylogenetic Tree(s): OG0006525_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_05G01720.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Sro29_g019000.1 Contig1384.g12743 FYVE zinc finger; Zinc finger, C3HC4 type (RING finger)... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Enrichment
CC GO:0005779 integral component of peroxisomal membrane IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
MF GO:0008418 protein-N-terminal asparagine amidohydrolase activity IEP Enrichment
BP GO:0010024 phytochromobilin biosynthetic process IEP Enrichment
BP GO:0016255 attachment of GPI anchor to protein IEP Enrichment
BP GO:0016559 peroxisome fission IEP Enrichment
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
BP GO:0048285 organelle fission IEP Enrichment
MF GO:0050897 cobalt ion binding IEP Enrichment
BP GO:0051202 phytochromobilin metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!