PTI_05G01130.1


Description : Ribosomal protein S17e [Interproscan].


Gene families : OG_01_0002798 (OrthoFinder) Phylogenetic Tree(s): OG0002798_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_05G01130.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cre12.g498250 30793608, RPS17 Protein biosynthesis.cytosolic ribosome.small subunit... 0.25 OrthoFinder
Cz02g24100.t1 No alias Ribosomal protein S17e [Interproscan]. 0.17 OrthoFinder
Dusal.0462s00007.1 33197488 Ribosomal protein S17e [Interproscan]. 0.08 OrthoFinder
EOD21818 No alias Ribosomal protein S17e [Interproscan]. 0.06 OrthoFinder
OT_04G05050.1 No alias Ribosomal protein S17e [Interproscan]. 0.16 OrthoFinder
Sro13_g009690.1 Contig337.g4510 40S ribosomal protein S17 0.28 OrthoFinder
SymbC1.scaffold3580.6 3580.6 Ribosomal protein S17e [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold3580.7 3580.7 Ribosomal protein S17e [Interproscan]. 0.06 OrthoFinder
TP16G00420.1 No alias Ribosomal protein S17e [Interproscan]. 0.22 OrthoFinder
Transcript_contig_80128 80128 Ribosomal protein S17e [Interproscan]. 0.04 OrthoFinder
Vocar.0006s0265.1 32893973 Ribosomal protein S17e [Interproscan]. 0.13 OrthoFinder
XM_002504075.1 MICPUN_76945, 76945 Ribosomal protein S17e [Interproscan]. 0.24 OrthoFinder
XM_003059599.1 MicpuC2_34073, 34073 Ribosomal protein S17e [Interproscan]. 0.08 OrthoFinder
lcl|BLLF01003084.1_cds_GFH26294.1_20771 HaLaN_24421, GFH26294 Ribosomal protein S17e [Interproscan]. 0.08 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56597.1_9573 PRW56597 40S ribosomal S17 isoform A 0.15 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491192.1_5820 KAA8491192 40S ribosomal protein S17 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006448 regulation of translational elongation IEP Enrichment
BP GO:0006449 regulation of translational termination IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009891 positive regulation of biosynthetic process IEP Enrichment
BP GO:0009893 positive regulation of metabolic process IEP Enrichment
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
BP GO:0010628 positive regulation of gene expression IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
BP GO:0031325 positive regulation of cellular metabolic process IEP Enrichment
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0045727 positive regulation of translation IEP Enrichment
BP GO:0045901 positive regulation of translational elongation IEP Enrichment
BP GO:0045905 positive regulation of translational termination IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051247 positive regulation of protein metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001210 Ribosomal_S17e 3 120
No external refs found!