PTI_05G00880.1

Description : Pre-mRNA-splicing factor Isy1 [Interproscan].

Gene families : OG_01_0002783 (OrthoFinder) Phylogenetic Tree(s): OG0002783_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: PTI_05G00880.1
Cluster	HCCA: Cluster_86

Target	Alias	Description	ECC score	Gene Family Method
Cre10.g427150	30789885	RNA processing.RNA splicing.spliceosome-associated...	0.01	OrthoFinder
Transcript_contig_58335	58335	Pre-mRNA-splicing factor Isy1 [Interproscan].	0.01	OrthoFinder
lcl\|BLLF01003798.1_cds_GFH28247.1_22724	HaLaN_26709, GFH28247	Pre-mRNA-splicing factor Isy1 [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000350	generation of catalytic spliceosome for second transesterification step	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0022618	ribonucleoprotein complex assembly	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071826	ribonucleoprotein complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000439	transcription factor TFIIH core complex	IEP	Enrichment
CC	GO:0005667	transcription regulator complex	IEP	Enrichment
BP	GO:0006289	nucleotide-excision repair	IEP	Enrichment
BP	GO:0007034	vacuolar transport	IEP	Enrichment
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Enrichment
BP	GO:0010035	response to inorganic substance	IEP	Enrichment
BP	GO:0010038	response to metal ion	IEP	Enrichment
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Enrichment
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Enrichment
MF	GO:0016755	aminoacyltransferase activity	IEP	Enrichment
MF	GO:0016756	glutathione gamma-glutamylcysteinyltransferase activity	IEP	Enrichment
BP	GO:0019748	secondary metabolic process	IEP	Enrichment
BP	GO:0042221	response to chemical	IEP	Enrichment
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Enrichment
BP	GO:0046937	phytochelatin metabolic process	IEP	Enrichment
BP	GO:0046938	phytochelatin biosynthetic process	IEP	Enrichment
BP	GO:0050896	response to stimulus	IEP	Enrichment
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	Enrichment
CC	GO:0140513	nuclear protein-containing complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR009360	Isy1	1	235

External Links

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