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  5. PTI_05G00150.1

PTI_05G00150.1


Description : MCM domain; MCM, AAA-lid domain; MCM OB domain [Interproscan].


Gene families : OG_01_0003992 (OrthoFinder) Phylogenetic Tree(s): OG0003992_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_05G00150.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cre01.g023150 30789174, MCM5 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.04 OrthoFinder
Cz07g07100.t1 No alias MCM, AAA-lid domain; MCM OB domain; MCM domain [Interproscan]. 0.04 OrthoFinder
Sro2445_g327910.1 Contig786.g8798 Zygotic DNA replication licensing factor mcm3 0.06 OrthoFinder
Transcript_contig_67480 67480 MCM, AAA-lid domain; MCM domain; MCM N-terminal domain;... 0.02 OrthoFinder
Vocar.0007s0287.1 32887930 MCM N-terminal domain; MCM, AAA-lid domain; MCM OB... 0.03 OrthoFinder
lcl|BLLF01002005.1_cds_GFH22273.1_16750 HaLaN_19715, GFH22273 DNA helicase 0.05 OrthoFinder
lcl|LHPG02000009.1_cds_PRW55991.1_10189 PRW55991 DNA replication licensing factor MCM5 0.04 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494550.1_3080 KAA8494550 DNA replication licensing factor MCM5 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
InterPro domains Description Start Stop
IPR041562 MCM_lid 666 763
IPR033762 MCM_OB 201 330
IPR001208 MCM_dom 370 593
No external refs found!