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  5. PTI_05G00040.1

PTI_05G00040.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase; Complex 1 LYR protein [Interproscan].


Gene families : OG_01_0000022 (OrthoFinder) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_05G00040.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
PTI_00G00820.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_00G03380.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_00G03740.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_03G04560.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_04G05890.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_05G04500.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_08G04530.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_08G04540.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_11G00100.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_11G04480.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_13G00100.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_13G00110.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_13G00130.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_16G00060.1 No alias Dehydrogenase, E1 component; Reverse transcriptase,... 0.02 OrthoFinder
PTI_18G00350.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_21G02780.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_22G00420.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_26G00310.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_31G00170.1 No alias Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
BP GO:0007346 regulation of mitotic cell cycle IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
BP GO:0031145 anaphase-promoting complex-dependent catabolic process IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
BP GO:0033045 regulation of sister chromatid segregation IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0051983 regulation of chromosome segregation IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Enrichment
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Enrichment
BP GO:1905818 regulation of chromosome separation IEP Enrichment
InterPro domains Description Start Stop
IPR008011 Complex1_LYR 843 896
IPR013103 RVT_2 323 519
No external refs found!