PTI_04G05550.1


Description : Pentatricopeptide repeat [Interproscan].


Gene families : OG_01_0012399 (OrthoFinder) Phylogenetic Tree(s): OG0012399_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_04G05550.1
Cluster HCCA: Cluster_75


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
CC GO:0061617 MICOS complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 503 566
IPR002885 Pentatricopeptide_repeat 197 224
IPR002885 Pentatricopeptide_repeat 247 295
No external refs found!