1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_04G05330.1

PTI_04G05330.1


Description : Transketolase, C-terminal domain; Transketolase-like, pyrimidine-binding domain; Transketolase, N-terminal [Interproscan].


Gene families : OG_01_0001118 (OrthoFinder) Phylogenetic Tree(s): OG0001118_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_04G05330.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020604.17 tig00020604_g11852.t1 Carbohydrate metabolism.oxidative pentose phosphate... 0.03 OrthoFinder
Cre02.g080200 30786367, TRK1 Carbohydrate metabolism.oxidative pentose phosphate... 0.08 OrthoFinder
Cz03g04080.t1 No alias Transketolase-like, pyrimidine-binding domain;... 0.02 OrthoFinder
Dusal.0279s00001.1 33195860 Transketolase, C-terminal domain; Transketolase-like,... 0.01 OrthoFinder
EOD09974 No alias Plastid transketolase [Ensembl]. 0.08 OrthoFinder
EOD30484 No alias Transketolase [Ensembl]. 0.02 OrthoFinder
OT_07G04480.1 No alias Transketolase, C-terminal domain; Transketolase-like,... 0.02 OrthoFinder
Sro178_g078290.1 Contig275.g3554 Transketolase 1 0.12 OrthoFinder
Sro524_g159900.1 Contig202.g2387 Transketolase 1 0.03 OrthoFinder
SymbC1.scaffold21725.1 21725.1 Transketolase, N-terminal [Interproscan]. 0.01 OrthoFinder
TP02G01830.1 No alias Transketolase, N-terminal; Transketolase-like,... 0.09 OrthoFinder
Vocar.0004s0460.1 32889662 Transketolase, N-terminal; Transketolase, C-terminal... 0.05 OrthoFinder
XM_002503133.1 MICPUN_104852, 104852 Transketolase chloroplast precursor 0.06 OrthoFinder
XM_003061150.1 MicpuC2_34943, 34943 Transketolase-like, pyrimidine-binding domain;... 0.06 OrthoFinder
lcl|BLLF01001565.1_cds_GFH20053.1_14530 HaLaN_17110, GFH20053 Transketolase_1 domain-containing protein 0.04 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57509.1_8943 PRW57509 Transketolase 7 0.05 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496079.1_2077 KAA8496079 Transketolase, chloroplastic 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Enrichment
BP GO:0052646 alditol phosphate metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR033248 Transketolase_C 599 702
IPR005475 Transketolase-like_Pyr-bd 406 577
IPR005474 Transketolase_N 54 383
No external refs found!