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  5. PTI_04G05280.1

PTI_04G05280.1


Description : Uroporphyrinogen decarboxylase (URO-D) [Interproscan].


Gene families : OG_01_0000468 (OrthoFinder) Phylogenetic Tree(s): OG0000468_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_04G05280.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021319.48 tig00021319_g20242.t1 Coenzyme metabolism.tetrapyrrol... 0.05 OrthoFinder
Cre02.g073700 30785831, UPD3 Coenzyme metabolism.tetrapyrrol... 0.11 OrthoFinder
Cre02.g076300 30785008, UPD2 Coenzyme metabolism.tetrapyrrol... 0.09 OrthoFinder
Cre11.g467700 30776050, UPD1 Coenzyme metabolism.tetrapyrrol... 0.1 OrthoFinder
Cz14g23190.t1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.1 OrthoFinder
Cz16g13070.t1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.1 OrthoFinder
Dusal.0040s00025.1 33197281 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.03 OrthoFinder
Dusal.0096s00026.1 33195840 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.03 OrthoFinder
Dusal.0437s00004.1 33198273 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.03 OrthoFinder
EOD08597 No alias Uroporphyrinogen decarboxylase [Ensembl]. 0.04 OrthoFinder
EOD39324 No alias Uroporphyrinogen decarboxylase [Ensembl]. 0.06 OrthoFinder
OT_01G03410.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.08 OrthoFinder
OT_12G02430.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.04 OrthoFinder
OT_17G00160.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.06 OrthoFinder
Sro1503_g278020.1 Contig1159.g11075 Uroporphyrinogen decarboxylase 0.19 OrthoFinder
Sro350_g123690.1 Contig1556.g14139 Uroporphyrinogen decarboxylase 0.16 OrthoFinder
Sro80_g043120.1 Contig92.g1056 Uroporphyrinogen decarboxylase 0.18 OrthoFinder
TP02G01280.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.2 OrthoFinder
TP03G09170.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.17 OrthoFinder
Transcript_contig_58561 58561 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.03 OrthoFinder
Transcript_contig_59670 59670 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.01 OrthoFinder
Transcript_contig_89604 89604 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.03 OrthoFinder
Vocar.0012s0224.1 32894830 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.02 OrthoFinder
Vocar.0056s0027.1 32896685 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.06 OrthoFinder
XM_002508574.1 MICPUN_104963, 104963 Uroporphyrinogen decarboxylase chloroplast precursor (HEME2) 0.04 OrthoFinder
XM_003055316.1 MicpuC2_49908, 49908 Uroporphyrinogen decarboxylase chloroplast precursor (HEME1) 0.07 OrthoFinder
XM_003064073.1 MicpuC2_23171, 23171 Uroporphyrinogen decarboxylase chloroplast precursor (HEME2) 0.07 OrthoFinder
lcl|BLLF01000412.1_cds_GFH11531.1_6008 HaLaN_07044, GFH11531 Uroporphyrinogen decarboxylase 0.04 OrthoFinder
lcl|BLLF01000728.1_cds_GFH14454.1_8931 HaLaN_10514, GFH14454 Uroporphyrinogen decarboxylase 0.07 OrthoFinder
lcl|BLLF01001154.1_cds_GFH17479.1_11956 HaLaN_14128, GFH17479 Uroporphyrinogen decarboxylase 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45352.1_1514 PRW45352 Uroporphyrinogen decarboxylase chloroplast precursor 0.06 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18323.1_5795 PRW18323 Uroporphyrinogen decarboxylase 0.04 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497188.1_917 KAA8497188 Uroporphyrinogen decarboxylase 0.03 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492826.1_2562 KAA8492826 Uroporphyrinogen decarboxylase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEA Interproscan
BP GO:0006779 porphyrin-containing compound biosynthetic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000257 Uroporphyrinogen_deCOase 57 405
No external refs found!