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  5. PTI_04G04430.1

PTI_04G04430.1


Description : G-patch domain [Interproscan].


Gene families : OG_01_0002250 (OrthoFinder) Phylogenetic Tree(s): OG0002250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_04G04430.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cre07.g347400 30774277 Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder
Cz02g35040.t1 No alias G-patch domain [Interproscan]. 0.03 OrthoFinder
OT_01G03500.1 No alias G-patch domain [Interproscan]. 0.05 OrthoFinder
Sro650_g181440.1 Contig647.g7760 PIN2/TERF1-interacting telomerase inhibitor 1 0.07 OrthoFinder
TP01G00520.1 No alias G-patch domain [Interproscan]. 0.02 OrthoFinder
TP03G08160.1 No alias G-patch domain [Interproscan]. 0.05 OrthoFinder
Transcript_contig_54158 54158 G-patch domain [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01000174.1_cds_GFH08637.1_3114 HaLaN_03626, GFH08637 G-patch domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60174.1_6320 PRW60174 D111 G-patch domain-containing family 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497644.1_6597 KAA8497644 PIN2/TERF1-interacting telomerase inhibitor 1 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499929.1_8882 KAA8499929 G-patch domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0031418 L-ascorbic acid binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000467 G_patch_dom 47 90
No external refs found!