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Description : Putative 5-3 exonuclease [Interproscan].
Gene families : OG_01_0002196 (OrthoFinder) Phylogenetic Tree(s): OG0002196_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_04G03760.1 | |
| Cluster | HCCA: Cluster_103 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| lcl|VRMN01000002.1_cds_KAA8496748.1_477 | KAA8496748 | 5'-3' exoribonuclease 1 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0004527 | exonuclease activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| MF | GO:0005534 | galactose binding | IEP | Enrichment |
| BP | GO:0006265 | DNA topological change | IEP | Enrichment |
| BP | GO:0006497 | protein lipidation | IEP | Enrichment |
| BP | GO:0006505 | GPI anchor metabolic process | IEP | Enrichment |
| BP | GO:0006506 | GPI anchor biosynthetic process | IEP | Enrichment |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | Enrichment |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | Enrichment |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Enrichment |
| BP | GO:0006664 | glycolipid metabolic process | IEP | Enrichment |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Enrichment |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Enrichment |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | Enrichment |
| MF | GO:0017176 | phosphatidylinositol N-acetylglucosaminyltransferase activity | IEP | Enrichment |
| MF | GO:0030246 | carbohydrate binding | IEP | Enrichment |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Enrichment |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Enrichment |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | Enrichment |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | Enrichment |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Enrichment |
| MF | GO:0048029 | monosaccharide binding | IEP | Enrichment |
| BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004859 | Put_53exo | 1 | 219 |
| No external refs found! |